While in breadboard mode the leads of both transistors are correctly identified from left to right as emitter, and base, collector, in schematic mode the labels are all wrong and in PCB mode the silk screen is backwards (CBE instead of EBC).  Now while the latter is not that big of a deal--you just have to remember to install your transistors backwards--the schematic issue is huge, especially for those of us who design our circuits primarily in schematic mode.  This issue is for both npn and pnp transistors.

Hi Michael, this issue is also serious to us, and sorry for not replying to this thread earlier. 

We have made an attempt to fix it in the latest release from last week, please have a look. If you find it still to be incorrect, feel free to investigate it further. The pin definitions can be found in the part definition, in this case in \parts\core\transistor_signal_NPN_TO92.fzp. It contains the mappings of pins to corresponding id in the SVG illustrations.

Thanks, andré